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PDF-2IntroductionThegoalofthistutorialistogiveanoverviewofLEAfunctionaliti

PDF-2IntroductionThegoalofthistutorialistogiveanoverviewofLEAfunctionaliti

CreateapcaProjectobjectpcpcpcagenotypeslfmmscaleTRUEThenumberofsigni cantcomponentscanbeevaluatedusinggraphicalmethodsbasedonthescreeplotFigure1orcomputingTracyWidomtestswiththeLEAfun

#CreateapcaProjectobject:pc.pc=pca("genotypes.lfmm" scale=TRUE)Thenumberofsigni cantcomponentscanbeevaluatedusinggraphicalmethodsbasedonthescree-plot(Figure1)orcomputingTracy-WidomtestswiththeLEAfun

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